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Cluster: HRGMv2_1732_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1732_34 HRGMv2_1732_34_13 13372 13857 - 3.D.7.2.3
TC HRGMv2_1732_34 HRGMv2_1732_34_14 13938 15614 - 3.D.7.2.3
TC HRGMv2_1732_34 HRGMv2_1732_34_15 15626 16573 - 3.D.7.2.2
STP HRGMv2_1732_34 HRGMv2_1732_34_16 17117 18382 + Aminotran_1_2
peptidase HRGMv2_1732_34 HRGMv2_1732_34_17 18647 19615 - S11.005
TC HRGMv2_1732_34 HRGMv2_1732_34_18 19625 20731 - 2.A.86.2.2
CAZyme HRGMv2_1732_34 HRGMv2_1732_34_19 21303 24332 + GT2
pfam HRGMv2_1732_34 HRGMv2_1732_34_20 24492 24980 - GreA_GreB | GreA_GreB_N
TC HRGMv2_1732_34 HRGMv2_1732_34_21 25433 26986 + 2.A.1.3.45
Gene ID: HRGMv2_1732_34_13
Type: TC
Location: 13372 - 13857 (-)
Gene ID: HRGMv2_1732_34_14
Type: TC
Location: 13938 - 15614 (-)
Gene ID: HRGMv2_1732_34_15
Type: TC
Location: 15626 - 16573 (-)
Gene ID: HRGMv2_1732_34_16
Type: STP
Location: 17117 - 18382 (+)
Gene ID: HRGMv2_1732_34_17
Type: peptidase
Location: 18647 - 19615 (-)
Gene ID: HRGMv2_1732_34_18
Type: TC
Location: 19625 - 20731 (-)
Gene ID: HRGMv2_1732_34_19
Type: CAZyme
Location: 21303 - 24332 (+)
Gene ID: HRGMv2_1732_34_20
Type: pfam
Location: 24492 - 24980 (-)
Gene ID: HRGMv2_1732_34_21
Type: TC
Location: 25433 - 26986 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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