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Cluster: HRGMv2_1732_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1732_19 HRGMv2_1732_19_6 4977 6380 + 3.A.1.109.4
TC HRGMv2_1732_19 HRGMv2_1732_19_7 6646 9429 + 3.A.1.109.3
TC HRGMv2_1732_19 HRGMv2_1732_19_8 9431 11455 + 3.A.1.109.4
NULL(UNKNOWN) HRGMv2_1732_19 HRGMv2_1732_19_9 11477 12454 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_1732_19 HRGMv2_1732_19_10 12424 13632 + PAS
CAZyme HRGMv2_1732_19 HRGMv2_1732_19_11 13644 14864 + GT4
Gene ID: HRGMv2_1732_19_6
Type: TC
Location: 4977 - 6380 (+)
Gene ID: HRGMv2_1732_19_7
Type: TC
Location: 6646 - 9429 (+)
Gene ID: HRGMv2_1732_19_8
Type: TC
Location: 9431 - 11455 (+)
Gene ID: HRGMv2_1732_19_9
Type:
Location: 11477 - 12454 (+)
Gene ID: HRGMv2_1732_19_10
Type: STP
Location: 12424 - 13632 (+)
Gene ID: HRGMv2_1732_19_11
Type: CAZyme
Location: 13644 - 14864 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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