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Cluster: HRGMv2_1732_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1732_11 HRGMv2_1732_11_1 298 1974 - GH23
pfam HRGMv2_1732_11 HRGMv2_1732_11_2 2110 2916 + SpoU_methylase | SpoU_sub_bind
TC HRGMv2_1732_11 HRGMv2_1732_11_3 3323 3592 - 3.A.6.2.1
TC HRGMv2_1732_11 HRGMv2_1732_11_4 3684 4361 - 3.A.6.2.1
pfam HRGMv2_1732_11 HRGMv2_1732_11_5 4411 5076 - FliO
TC HRGMv2_1732_11 HRGMv2_1732_11_6 5069 5635 - 3.A.6.2.1
Gene ID: HRGMv2_1732_11_1
Type: CAZyme
Location: 298 - 1974 (-)
Gene ID: HRGMv2_1732_11_2
Type: pfam
Location: 2110 - 2916 (+)
Gene ID: HRGMv2_1732_11_3
Type: TC
Location: 3323 - 3592 (-)
Gene ID: HRGMv2_1732_11_4
Type: TC
Location: 3684 - 4361 (-)
Gene ID: HRGMv2_1732_11_5
Type: pfam
Location: 4411 - 5076 (-)
Gene ID: HRGMv2_1732_11_6
Type: TC
Location: 5069 - 5635 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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