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Cluster: HRGMv2_1732_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1732_9 HRGMv2_1732_9_35 41223 43130 + 1.B.52.2.1
pfam HRGMv2_1732_9 HRGMv2_1732_9_36 43369 43812 - Cytochrom_CIII
NULL(UNKNOWN) HRGMv2_1732_9 HRGMv2_1732_9_37 44259 45236 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1732_9 HRGMv2_1732_9_38 45548 46207 - 5.A.3.2.1
TC HRGMv2_1732_9 HRGMv2_1732_9_39 46257 48680 - 5.A.3.2.1
TC HRGMv2_1732_9 HRGMv2_1732_9_40 48729 49295 - 5.A.3.2.1
pfam HRGMv2_1732_9 HRGMv2_1732_9_41 49758 51437 - MoCF_biosynth | FmdE | zf-Tbcl_FmdE
pfam HRGMv2_1732_9 HRGMv2_1732_9_42 51654 52322 - NTP_transf_3
TC HRGMv2_1732_9 HRGMv2_1732_9_43 52612 53100 + 9.B.160.1.5
pfam HRGMv2_1732_9 HRGMv2_1732_9_44 53423 54220 + MazG
CAZyme HRGMv2_1732_9 HRGMv2_1732_9_45 54181 56517 + GH13_33
CAZyme HRGMv2_1732_9 HRGMv2_1732_9_46 56514 58946 + GT83
Gene ID: HRGMv2_1732_9_35
Type: TC
Location: 41223 - 43130 (+)
Gene ID: HRGMv2_1732_9_36
Type: pfam
Location: 43369 - 43812 (-)
Gene ID: HRGMv2_1732_9_37
Type:
Location: 44259 - 45236 (-)
Gene ID: HRGMv2_1732_9_38
Type: TC
Location: 45548 - 46207 (-)
Gene ID: HRGMv2_1732_9_39
Type: TC
Location: 46257 - 48680 (-)
Gene ID: HRGMv2_1732_9_40
Type: TC
Location: 48729 - 49295 (-)
Gene ID: HRGMv2_1732_9_41
Type: pfam
Location: 49758 - 51437 (-)
Gene ID: HRGMv2_1732_9_42
Type: pfam
Location: 51654 - 52322 (-)
Gene ID: HRGMv2_1732_9_43
Type: TC
Location: 52612 - 53100 (+)
Gene ID: HRGMv2_1732_9_44
Type: pfam
Location: 53423 - 54220 (+)
Gene ID: HRGMv2_1732_9_45
Type: CAZyme
Location: 54181 - 56517 (+)
Gene ID: HRGMv2_1732_9_46
Type: CAZyme
Location: 56514 - 58946 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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