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Cluster: HRGMv2_1731_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1731_6 HRGMv2_1731_6_167 188380 188952 + 3.A.6.2.1
pfam HRGMv2_1731_6 HRGMv2_1731_6_168 188945 189610 + FliO
TC HRGMv2_1731_6 HRGMv2_1731_6_169 189660 190337 + 3.A.6.2.1
TC HRGMv2_1731_6 HRGMv2_1731_6_170 190429 190698 + 3.A.6.2.1
pfam HRGMv2_1731_6 HRGMv2_1731_6_171 191112 191918 - SpoU_methylase | SpoU_sub_bind
CAZyme HRGMv2_1731_6 HRGMv2_1731_6_172 192055 193722 + GH23
Gene ID: HRGMv2_1731_6_167
Type: TC
Location: 188380 - 188952 (+)
Gene ID: HRGMv2_1731_6_168
Type: pfam
Location: 188945 - 189610 (+)
Gene ID: HRGMv2_1731_6_169
Type: TC
Location: 189660 - 190337 (+)
Gene ID: HRGMv2_1731_6_170
Type: TC
Location: 190429 - 190698 (+)
Gene ID: HRGMv2_1731_6_171
Type: pfam
Location: 191112 - 191918 (-)
Gene ID: HRGMv2_1731_6_172
Type: CAZyme
Location: 192055 - 193722 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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