Cluster: HRGMv2_1731_CGC14
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1731
- CGC Family ID: CGCFAM_04022
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1731_6 | HRGMv2_1731_6_92 | 98838 | 100595 | + | 1.B.52.2.2 |
| TC | HRGMv2_1731_6 | HRGMv2_1731_6_93 | 100935 | 103079 | + | 1.B.52.2.1 |
| pfam | HRGMv2_1731_6 | HRGMv2_1731_6_94 | 103414 | 104070 | - | TraT |
| NULL(UNKNOWN) | HRGMv2_1731_6 | HRGMv2_1731_6_95 | 104515 | 105234 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1731_6 | HRGMv2_1731_6_96 | 105546 | 107792 | + | 3.A.7.7.1 |
| pfam | HRGMv2_1731_6 | HRGMv2_1731_6_97 | 107779 | 108927 | + | XdhC_CoxI | XdhC_C |
| NULL(UNKNOWN) | HRGMv2_1731_6 | HRGMv2_1731_6_98 | 109188 | 109826 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1731_6 | HRGMv2_1731_6_99 | 110052 | 111167 | + | 2.A.6.2.45 |
| TC | HRGMv2_1731_6 | HRGMv2_1731_6_100 | 111174 | 114377 | + | 2.A.6.2.22 |
| TC | HRGMv2_1731_6 | HRGMv2_1731_6_101 | 114374 | 115969 | + | 2.A.6.2.46 |
| NULL(UNKNOWN) | HRGMv2_1731_6 | HRGMv2_1731_6_102 | 116251 | 116898 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1731_6 | HRGMv2_1731_6_103 | 117245 | 118420 | + | T6SS_VgrG3-like_C |
| CAZyme | HRGMv2_1731_6 | HRGMv2_1731_6_104 | 118435 | 120159 | + | GT9 |
Gene ID: HRGMv2_1731_6_92
Type: TC
Location: 98838 - 100595 (+)
Type: TC
Location: 98838 - 100595 (+)
Gene ID: HRGMv2_1731_6_93
Type: TC
Location: 100935 - 103079 (+)
Type: TC
Location: 100935 - 103079 (+)
Gene ID: HRGMv2_1731_6_94
Type: pfam
Location: 103414 - 104070 (-)
Type: pfam
Location: 103414 - 104070 (-)
Gene ID: HRGMv2_1731_6_95
Type:
Location: 104515 - 105234 (-)
Type:
Location: 104515 - 105234 (-)
Gene ID: HRGMv2_1731_6_96
Type: TC
Location: 105546 - 107792 (+)
Type: TC
Location: 105546 - 107792 (+)
Gene ID: HRGMv2_1731_6_97
Type: pfam
Location: 107779 - 108927 (+)
Type: pfam
Location: 107779 - 108927 (+)
Gene ID: HRGMv2_1731_6_98
Type:
Location: 109188 - 109826 (+)
Type:
Location: 109188 - 109826 (+)
Gene ID: HRGMv2_1731_6_99
Type: TC
Location: 110052 - 111167 (+)
Type: TC
Location: 110052 - 111167 (+)
Gene ID: HRGMv2_1731_6_100
Type: TC
Location: 111174 - 114377 (+)
Type: TC
Location: 111174 - 114377 (+)
Gene ID: HRGMv2_1731_6_101
Type: TC
Location: 114374 - 115969 (+)
Type: TC
Location: 114374 - 115969 (+)
Gene ID: HRGMv2_1731_6_102
Type:
Location: 116251 - 116898 (+)
Type:
Location: 116251 - 116898 (+)
Gene ID: HRGMv2_1731_6_103
Type: pfam
Location: 117245 - 118420 (+)
Type: pfam
Location: 117245 - 118420 (+)
Gene ID: HRGMv2_1731_6_104
Type: CAZyme
Location: 118435 - 120159 (+)
Type: CAZyme
Location: 118435 - 120159 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio sp900243745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.