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Cluster: HRGMv2_1731_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1731_4 HRGMv2_1731_4_219 254812 255483 + 1.B.6.2.13
TC HRGMv2_1731_4 HRGMv2_1731_4_220 255718 257271 - 2.A.1.3.45
pfam HRGMv2_1731_4 HRGMv2_1731_4_221 257728 258216 + GreA_GreB | GreA_GreB_N
NULL(UNKNOWN) HRGMv2_1731_4 HRGMv2_1731_4_222 258091 258348 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1731_4 HRGMv2_1731_4_223 258374 261403 - GT2
TC HRGMv2_1731_4 HRGMv2_1731_4_224 261992 263098 + 2.A.86.2.2
peptidase HRGMv2_1731_4 HRGMv2_1731_4_225 263108 264112 + S11.005
STP HRGMv2_1731_4 HRGMv2_1731_4_226 264291 265556 - Aminotran_1_2
TC HRGMv2_1731_4 HRGMv2_1731_4_227 266098 267045 + 3.D.7.2.2
TC HRGMv2_1731_4 HRGMv2_1731_4_228 267057 268733 + 3.D.7.2.3
TC HRGMv2_1731_4 HRGMv2_1731_4_229 268813 269298 + 3.D.7.2.3
Gene ID: HRGMv2_1731_4_219
Type: TC
Location: 254812 - 255483 (+)
Gene ID: HRGMv2_1731_4_220
Type: TC
Location: 255718 - 257271 (-)
Gene ID: HRGMv2_1731_4_221
Type: pfam
Location: 257728 - 258216 (+)
Gene ID: HRGMv2_1731_4_222
Type:
Location: 258091 - 258348 (-)
Gene ID: HRGMv2_1731_4_223
Type: CAZyme
Location: 258374 - 261403 (-)
Gene ID: HRGMv2_1731_4_224
Type: TC
Location: 261992 - 263098 (+)
Gene ID: HRGMv2_1731_4_225
Type: peptidase
Location: 263108 - 264112 (+)
Gene ID: HRGMv2_1731_4_226
Type: STP
Location: 264291 - 265556 (-)
Gene ID: HRGMv2_1731_4_227
Type: TC
Location: 266098 - 267045 (+)
Gene ID: HRGMv2_1731_4_228
Type: TC
Location: 267057 - 268733 (+)
Gene ID: HRGMv2_1731_4_229
Type: TC
Location: 268813 - 269298 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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