Cluster: HRGMv2_1728_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1728
- CGC Family ID: CGCFAM_01452
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1728_18 | HRGMv2_1728_18_29 | 30574 | 31482 | + | 3.A.1.4.1 |
| TC | HRGMv2_1728_18 | HRGMv2_1728_18_30 | 31488 | 32723 | + | 3.A.1.4.1 |
| TC | HRGMv2_1728_18 | HRGMv2_1728_18_31 | 32720 | 33508 | + | 3.A.1.4.10 |
| TC | HRGMv2_1728_18 | HRGMv2_1728_18_32 | 33501 | 34205 | + | 3.A.1.4.8 |
| CAZyme | HRGMv2_1728_18 | HRGMv2_1728_18_33 | 35455 | 36540 | - | GT1 |
Gene ID: HRGMv2_1728_18_29
Type: TC
Location: 30574 - 31482 (+)
Type: TC
Location: 30574 - 31482 (+)
Gene ID: HRGMv2_1728_18_30
Type: TC
Location: 31488 - 32723 (+)
Type: TC
Location: 31488 - 32723 (+)
Gene ID: HRGMv2_1728_18_31
Type: TC
Location: 32720 - 33508 (+)
Type: TC
Location: 32720 - 33508 (+)
Gene ID: HRGMv2_1728_18_32
Type: TC
Location: 33501 - 34205 (+)
Type: TC
Location: 33501 - 34205 (+)
Gene ID: HRGMv2_1728_18_33
Type: CAZyme
Location: 35455 - 36540 (-)
Type: CAZyme
Location: 35455 - 36540 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio sp937926875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.