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Cluster: HRGMv2_1728_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1728_16 HRGMv2_1728_16_2 684 1355 - 3.A.1.3.2
TC HRGMv2_1728_16 HRGMv2_1728_16_3 1358 2107 - 3.A.1.3.24
TC HRGMv2_1728_16 HRGMv2_1728_16_4 2104 2931 - 3.A.1.3.23
TC HRGMv2_1728_16 HRGMv2_1728_16_5 3006 3749 - 3.A.1.3.11
TC HRGMv2_1728_16 HRGMv2_1728_16_6 3917 5314 + 9.B.18.1.2
CAZyme HRGMv2_1728_16 HRGMv2_1728_16_7 5543 6637 - GT4
Gene ID: HRGMv2_1728_16_2
Type: TC
Location: 684 - 1355 (-)
Gene ID: HRGMv2_1728_16_3
Type: TC
Location: 1358 - 2107 (-)
Gene ID: HRGMv2_1728_16_4
Type: TC
Location: 2104 - 2931 (-)
Gene ID: HRGMv2_1728_16_5
Type: TC
Location: 3006 - 3749 (-)
Gene ID: HRGMv2_1728_16_6
Type: TC
Location: 3917 - 5314 (+)
Gene ID: HRGMv2_1728_16_7
Type: CAZyme
Location: 5543 - 6637 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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