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Cluster: HRGMv2_1728_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1728_2 HRGMv2_1728_2_90 103652 104713 + GT2
pfam HRGMv2_1728_2 HRGMv2_1728_2_91 105017 105436 + ATP-synt_B
pfam HRGMv2_1728_2 HRGMv2_1728_2_92 105585 106130 + ATP-synt_B
TC HRGMv2_1728_2 HRGMv2_1728_2_93 106127 106678 + 3.A.2.1.2
TC HRGMv2_1728_2 HRGMv2_1728_2_94 106682 108190 + 3.A.2.1.2
TC HRGMv2_1728_2 HRGMv2_1728_2_95 108208 109089 + 3.A.2.1.7
TC HRGMv2_1728_2 HRGMv2_1728_2_96 109102 110523 + 3.A.2.1.3
Gene ID: HRGMv2_1728_2_90
Type: CAZyme
Location: 103652 - 104713 (+)
Gene ID: HRGMv2_1728_2_91
Type: pfam
Location: 105017 - 105436 (+)
Gene ID: HRGMv2_1728_2_92
Type: pfam
Location: 105585 - 106130 (+)
Gene ID: HRGMv2_1728_2_93
Type: TC
Location: 106127 - 106678 (+)
Gene ID: HRGMv2_1728_2_94
Type: TC
Location: 106682 - 108190 (+)
Gene ID: HRGMv2_1728_2_95
Type: TC
Location: 108208 - 109089 (+)
Gene ID: HRGMv2_1728_2_96
Type: TC
Location: 109102 - 110523 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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