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Cluster: HRGMv2_1728_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1728_35 HRGMv2_1728_35_19 19463 21964 - GT83
CAZyme HRGMv2_1728_35 HRGMv2_1728_35_20 21961 24075 - GH13_33
pfam HRGMv2_1728_35 HRGMv2_1728_35_21 24036 24833 - MazG
TC HRGMv2_1728_35 HRGMv2_1728_35_22 24855 25343 - 9.B.160.1.5
pfam HRGMv2_1728_35 HRGMv2_1728_35_23 25531 26313 + PrmA | Methyltransf_16
TF HRGMv2_1728_35 HRGMv2_1728_35_24 26635 27054 + 0042628
TC HRGMv2_1728_35 HRGMv2_1728_35_25 27054 27845 + 9.B.10.1.1
Gene ID: HRGMv2_1728_35_19
Type: CAZyme
Location: 19463 - 21964 (-)
Gene ID: HRGMv2_1728_35_20
Type: CAZyme
Location: 21961 - 24075 (-)
Gene ID: HRGMv2_1728_35_21
Type: pfam
Location: 24036 - 24833 (-)
Gene ID: HRGMv2_1728_35_22
Type: TC
Location: 24855 - 25343 (-)
Gene ID: HRGMv2_1728_35_23
Type: pfam
Location: 25531 - 26313 (+)
Gene ID: HRGMv2_1728_35_24
Type: TF
Location: 26635 - 27054 (+)
Gene ID: HRGMv2_1728_35_25
Type: TC
Location: 27054 - 27845 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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