Cluster: HRGMv2_1724_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1724
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1724_5 | HRGMv2_1724_5_42 | 48231 | 49676 | + | 2.A.114.1.4 |
| STP | HRGMv2_1724_5 | HRGMv2_1724_5_43 | 49822 | 51363 | - | PALP |
| CAZyme | HRGMv2_1724_5 | HRGMv2_1724_5_44 | 51749 | 52882 | - | GT2 |
| pfam | HRGMv2_1724_5 | HRGMv2_1724_5_45 | 52949 | 53818 | - | AIRS | AIRS_C |
| TC | HRGMv2_1724_5 | HRGMv2_1724_5_46 | 54170 | 56089 | + | 3.A.1.120.6 |
| TF | HRGMv2_1724_5 | HRGMv2_1724_5_47 | 56260 | 57831 | + | HTH_8 |
| TC | HRGMv2_1724_5 | HRGMv2_1724_5_48 | 58488 | 59864 | + | 1.A.11.2.7 |
Gene ID: HRGMv2_1724_5_42
Type: TC
Location: 48231 - 49676 (+)
Type: TC
Location: 48231 - 49676 (+)
Gene ID: HRGMv2_1724_5_43
Type: STP
Location: 49822 - 51363 (-)
Type: STP
Location: 49822 - 51363 (-)
Gene ID: HRGMv2_1724_5_44
Type: CAZyme
Location: 51749 - 52882 (-)
Type: CAZyme
Location: 51749 - 52882 (-)
Gene ID: HRGMv2_1724_5_45
Type: pfam
Location: 52949 - 53818 (-)
Type: pfam
Location: 52949 - 53818 (-)
Gene ID: HRGMv2_1724_5_46
Type: TC
Location: 54170 - 56089 (+)
Type: TC
Location: 54170 - 56089 (+)
Gene ID: HRGMv2_1724_5_47
Type: TF
Location: 56260 - 57831 (+)
Type: TF
Location: 56260 - 57831 (+)
Gene ID: HRGMv2_1724_5_48
Type: TC
Location: 58488 - 59864 (+)
Type: TC
Location: 58488 - 59864 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio sp900319575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.