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Cluster: HRGMv2_1724_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1724_26 HRGMv2_1724_26_14 14709 15308 + 2.A.124.1.2
pfam HRGMv2_1724_26 HRGMv2_1724_26_15 15339 16073 + Flavodoxin_2 | FMN_red
pfam HRGMv2_1724_26 HRGMv2_1724_26_16 16167 17354 - Aminotran_5
TC HRGMv2_1724_26 HRGMv2_1724_26_17 17524 18903 - 2.A.22.5.3
NULL(UNKNOWN) HRGMv2_1724_26 HRGMv2_1724_26_18 19128 21476 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1724_26 HRGMv2_1724_26_19 21623 25873 - GT3 | GT35
CAZyme HRGMv2_1724_26 HRGMv2_1724_26_20 26414 27613 - GH57
CAZyme HRGMv2_1724_26 HRGMv2_1724_26_21 27615 28967 - GT4
CAZyme HRGMv2_1724_26 HRGMv2_1724_26_22 28967 31054 - GH133
Gene ID: HRGMv2_1724_26_14
Type: TC
Location: 14709 - 15308 (+)
Gene ID: HRGMv2_1724_26_15
Type: pfam
Location: 15339 - 16073 (+)
Gene ID: HRGMv2_1724_26_16
Type: pfam
Location: 16167 - 17354 (-)
Gene ID: HRGMv2_1724_26_17
Type: TC
Location: 17524 - 18903 (-)
Gene ID: HRGMv2_1724_26_18
Type:
Location: 19128 - 21476 (+)
Gene ID: HRGMv2_1724_26_19
Type: CAZyme
Location: 21623 - 25873 (-)
Gene ID: HRGMv2_1724_26_20
Type: CAZyme
Location: 26414 - 27613 (-)
Gene ID: HRGMv2_1724_26_21
Type: CAZyme
Location: 27615 - 28967 (-)
Gene ID: HRGMv2_1724_26_22
Type: CAZyme
Location: 28967 - 31054 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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