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Cluster: HRGMv2_1723_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1723_11 HRGMv2_1723_11_3 1119 2408 - 3.A.11.1.3
pfam HRGMv2_1723_11 HRGMv2_1723_11_4 2650 3126 + tRNA_SAD
pfam HRGMv2_1723_11 HRGMv2_1723_11_5 3194 4123 + GFO_IDH_MocA | DAPDH_C
CAZyme HRGMv2_1723_11 HRGMv2_1723_11_6 5625 6788 + GH102
TC HRGMv2_1723_11 HRGMv2_1723_11_7 6924 8372 + 2.A.50.2.1
CAZyme HRGMv2_1723_11 HRGMv2_1723_11_8 8391 10412 + CE1
Gene ID: HRGMv2_1723_11_3
Type: TC
Location: 1119 - 2408 (-)
Gene ID: HRGMv2_1723_11_4
Type: pfam
Location: 2650 - 3126 (+)
Gene ID: HRGMv2_1723_11_5
Type: pfam
Location: 3194 - 4123 (+)
Gene ID: HRGMv2_1723_11_6
Type: CAZyme
Location: 5625 - 6788 (+)
Gene ID: HRGMv2_1723_11_7
Type: TC
Location: 6924 - 8372 (+)
Gene ID: HRGMv2_1723_11_8
Type: CAZyme
Location: 8391 - 10412 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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