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Cluster: HRGMv2_1723_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1723_53 HRGMv2_1723_53_9 7187 11563 + GT107
sulfatase HRGMv2_1723_53 HRGMv2_1723_53_10 11554 12291 + S1_2
NULL(UNKNOWN) HRGMv2_1723_53 HRGMv2_1723_53_11 12301 12537 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1723_53 HRGMv2_1723_53_12 12524 13933 + 4.C.1.1.16
pfam HRGMv2_1723_53 HRGMv2_1723_53_13 13926 15014 + LuxE
pfam HRGMv2_1723_53 HRGMv2_1723_53_14 14986 16191 + LuxC
CAZyme HRGMv2_1723_53 HRGMv2_1723_53_15 16448 18526 + GT107 | GT107
TC HRGMv2_1723_53 HRGMv2_1723_53_16 18523 19728 + 9.A.41.1.1
Gene ID: HRGMv2_1723_53_9
Type: CAZyme
Location: 7187 - 11563 (+)
Gene ID: HRGMv2_1723_53_10
Type: sulfatase
Location: 11554 - 12291 (+)
Gene ID: HRGMv2_1723_53_11
Type:
Location: 12301 - 12537 (+)
Gene ID: HRGMv2_1723_53_12
Type: TC
Location: 12524 - 13933 (+)
Gene ID: HRGMv2_1723_53_13
Type: pfam
Location: 13926 - 15014 (+)
Gene ID: HRGMv2_1723_53_14
Type: pfam
Location: 14986 - 16191 (+)
Gene ID: HRGMv2_1723_53_15
Type: CAZyme
Location: 16448 - 18526 (+)
Gene ID: HRGMv2_1723_53_16
Type: TC
Location: 18523 - 19728 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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