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Cluster: HRGMv2_1723_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1723_41 HRGMv2_1723_41_102 109095 110435 - 2.A.25.1.9
CAZyme HRGMv2_1723_41 HRGMv2_1723_41_103 110677 111900 + GH102
pfam HRGMv2_1723_41 HRGMv2_1723_41_104 112219 112677 - Metal_resist
pfam HRGMv2_1723_41 HRGMv2_1723_41_105 113040 113510 - Metal_resist
TC HRGMv2_1723_41 HRGMv2_1723_41_106 113952 115706 + 2.A.21.9.1
Gene ID: HRGMv2_1723_41_102
Type: TC
Location: 109095 - 110435 (-)
Gene ID: HRGMv2_1723_41_103
Type: CAZyme
Location: 110677 - 111900 (+)
Gene ID: HRGMv2_1723_41_104
Type: pfam
Location: 112219 - 112677 (-)
Gene ID: HRGMv2_1723_41_105
Type: pfam
Location: 113040 - 113510 (-)
Gene ID: HRGMv2_1723_41_106
Type: TC
Location: 113952 - 115706 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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