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Cluster: HRGMv2_1721_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1721_1 HRGMv2_1721_1_653 770556 772409 + GT4
TC HRGMv2_1721_1 HRGMv2_1721_1_654 772402 773445 + 9.B.18.2.1
pfam HRGMv2_1721_1 HRGMv2_1721_1_655 773442 774584 + Epimerase | Polysacc_synt_C
pfam HRGMv2_1721_1 HRGMv2_1721_1_656 774581 775723 + Epimerase_2
CAZyme HRGMv2_1721_1 HRGMv2_1721_1_657 775728 776906 + GT4
CAZyme HRGMv2_1721_1 HRGMv2_1721_1_658 776953 777675 + GT32
CAZyme HRGMv2_1721_1 HRGMv2_1721_1_659 777675 778544 + GT2
Gene ID: HRGMv2_1721_1_653
Type: CAZyme
Location: 770556 - 772409 (+)
Gene ID: HRGMv2_1721_1_654
Type: TC
Location: 772402 - 773445 (+)
Gene ID: HRGMv2_1721_1_655
Type: pfam
Location: 773442 - 774584 (+)
Gene ID: HRGMv2_1721_1_656
Type: pfam
Location: 774581 - 775723 (+)
Gene ID: HRGMv2_1721_1_657
Type: CAZyme
Location: 775728 - 776906 (+)
Gene ID: HRGMv2_1721_1_658
Type: CAZyme
Location: 776953 - 777675 (+)
Gene ID: HRGMv2_1721_1_659
Type: CAZyme
Location: 777675 - 778544 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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