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Cluster: HRGMv2_1721_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1721_1 HRGMv2_1721_1_2841 3227927 3228979 + GT9
TC HRGMv2_1721_1 HRGMv2_1721_1_2842 3229527 3230477 + 3.D.7.1.1
TC HRGMv2_1721_1 HRGMv2_1721_1_2843 3230493 3231917 + 3.D.7.2.3
STP HRGMv2_1721_1 HRGMv2_1721_1_2844 3232256 3232879 - Nitroreductase
TF HRGMv2_1721_1 HRGMv2_1721_1_2845 3232931 3233854 - HTH_11
TC HRGMv2_1721_1 HRGMv2_1721_1_2846 3234198 3234938 - 3.A.1.3.10
TC HRGMv2_1721_1 HRGMv2_1721_1_2847 3235357 3236115 + 3.A.1.3.2
TC HRGMv2_1721_1 HRGMv2_1721_1_2848 3236199 3236900 + 3.A.1.3.2
TC HRGMv2_1721_1 HRGMv2_1721_1_2849 3236954 3238654 + 2.A.53.3.9
Gene ID: HRGMv2_1721_1_2841
Type: CAZyme
Location: 3227927 - 3228979 (+)
Gene ID: HRGMv2_1721_1_2842
Type: TC
Location: 3229527 - 3230477 (+)
Gene ID: HRGMv2_1721_1_2843
Type: TC
Location: 3230493 - 3231917 (+)
Gene ID: HRGMv2_1721_1_2844
Type: STP
Location: 3232256 - 3232879 (-)
Gene ID: HRGMv2_1721_1_2845
Type: TF
Location: 3232931 - 3233854 (-)
Gene ID: HRGMv2_1721_1_2846
Type: TC
Location: 3234198 - 3234938 (-)
Gene ID: HRGMv2_1721_1_2847
Type: TC
Location: 3235357 - 3236115 (+)
Gene ID: HRGMv2_1721_1_2848
Type: TC
Location: 3236199 - 3236900 (+)
Gene ID: HRGMv2_1721_1_2849
Type: TC
Location: 3236954 - 3238654 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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