Cluster: HRGMv2_1721_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1721
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1721_1 | HRGMv2_1721_1_2567 | 2896830 | 2898197 | - | 2.A.47.5.2 |
| pfam | HRGMv2_1721_1 | HRGMv2_1721_1_2568 | 2898378 | 2899691 | - | malic | Malic_M |
| TC | HRGMv2_1721_1 | HRGMv2_1721_1_2569 | 2899998 | 2900783 | - | 3.D.10.1.3 |
| TC | HRGMv2_1721_1 | HRGMv2_1721_1_2570 | 2900942 | 2902813 | - | 3.D.10.1.3 |
| pfam | HRGMv2_1721_1 | HRGMv2_1721_1_2571 | 2902825 | 2903475 | - | Sdh_cyt |
| pfam | HRGMv2_1721_1 | HRGMv2_1721_1_2572 | 2904201 | 2904584 | - | Desulfoferrodox | Desulfoferrod_N |
| CAZyme | HRGMv2_1721_1 | HRGMv2_1721_1_2573 | 2904822 | 2906144 | - | GH102 |
Gene ID: HRGMv2_1721_1_2567
Type: TC
Location: 2896830 - 2898197 (-)
Type: TC
Location: 2896830 - 2898197 (-)
Gene ID: HRGMv2_1721_1_2568
Type: pfam
Location: 2898378 - 2899691 (-)
Type: pfam
Location: 2898378 - 2899691 (-)
Gene ID: HRGMv2_1721_1_2569
Type: TC
Location: 2899998 - 2900783 (-)
Type: TC
Location: 2899998 - 2900783 (-)
Gene ID: HRGMv2_1721_1_2570
Type: TC
Location: 2900942 - 2902813 (-)
Type: TC
Location: 2900942 - 2902813 (-)
Gene ID: HRGMv2_1721_1_2571
Type: pfam
Location: 2902825 - 2903475 (-)
Type: pfam
Location: 2902825 - 2903475 (-)
Gene ID: HRGMv2_1721_1_2572
Type: pfam
Location: 2904201 - 2904584 (-)
Type: pfam
Location: 2904201 - 2904584 (-)
Gene ID: HRGMv2_1721_1_2573
Type: CAZyme
Location: 2904822 - 2906144 (-)
Type: CAZyme
Location: 2904822 - 2906144 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Bilophila
Species
Bilophila wadsworthia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.