Cluster: HRGMv2_1721_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1721
- CGC Family ID: CGCFAM_06056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1721_1 | HRGMv2_1721_1_2138 | 2396647 | 2399322 | + | 2.A.6.4.3 |
| pfam | HRGMv2_1721_1 | HRGMv2_1721_1_2139 | 2400177 | 2401001 | + | Shikimate_DH | Shikimate_dh_N | SDH_C |
| CAZyme | HRGMv2_1721_1 | HRGMv2_1721_1_2140 | 2401218 | 2402192 | - | GT9 |
| pfam | HRGMv2_1721_1 | HRGMv2_1721_1_2141 | 2403100 | 2403729 | + | PhoU_div |
| TC | HRGMv2_1721_1 | HRGMv2_1721_1_2142 | 2403722 | 2404729 | + | 2.A.20.1.5 |
Gene ID: HRGMv2_1721_1_2138
Type: TC
Location: 2396647 - 2399322 (+)
Type: TC
Location: 2396647 - 2399322 (+)
Gene ID: HRGMv2_1721_1_2139
Type: pfam
Location: 2400177 - 2401001 (+)
Type: pfam
Location: 2400177 - 2401001 (+)
Gene ID: HRGMv2_1721_1_2140
Type: CAZyme
Location: 2401218 - 2402192 (-)
Type: CAZyme
Location: 2401218 - 2402192 (-)
Gene ID: HRGMv2_1721_1_2141
Type: pfam
Location: 2403100 - 2403729 (+)
Type: pfam
Location: 2403100 - 2403729 (+)
Gene ID: HRGMv2_1721_1_2142
Type: TC
Location: 2403722 - 2404729 (+)
Type: TC
Location: 2403722 - 2404729 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Bilophila
Species
Bilophila wadsworthia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.