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Cluster: HRGMv2_1721_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1721_1 HRGMv2_1721_1_1905 2147256 2148269 + 3.A.1.2.26
pfam HRGMv2_1721_1 HRGMv2_1721_1_1906 2148804 2149466 + Hydrolase | HAD | Hydrolase_like | HAD_2
CAZyme HRGMv2_1721_1 HRGMv2_1721_1_1907 2149640 2151625 - CE1
TC HRGMv2_1721_1 HRGMv2_1721_1_1908 2151644 2153092 - 2.A.50.2.1
CAZyme HRGMv2_1721_1 HRGMv2_1721_1_1909 2153228 2154391 - GH102
pfam HRGMv2_1721_1 HRGMv2_1721_1_1910 2154986 2155915 - GFO_IDH_MocA | DAPDH_C
pfam HRGMv2_1721_1 HRGMv2_1721_1_1911 2155983 2156459 - tRNA_SAD
TC HRGMv2_1721_1 HRGMv2_1721_1_1912 2156603 2157892 + 3.A.11.1.3
Gene ID: HRGMv2_1721_1_1905
Type: TC
Location: 2147256 - 2148269 (+)
Gene ID: HRGMv2_1721_1_1906
Type: pfam
Location: 2148804 - 2149466 (+)
Gene ID: HRGMv2_1721_1_1907
Type: CAZyme
Location: 2149640 - 2151625 (-)
Gene ID: HRGMv2_1721_1_1908
Type: TC
Location: 2151644 - 2153092 (-)
Gene ID: HRGMv2_1721_1_1909
Type: CAZyme
Location: 2153228 - 2154391 (-)
Gene ID: HRGMv2_1721_1_1910
Type: pfam
Location: 2154986 - 2155915 (-)
Gene ID: HRGMv2_1721_1_1911
Type: pfam
Location: 2155983 - 2156459 (-)
Gene ID: HRGMv2_1721_1_1912
Type: TC
Location: 2156603 - 2157892 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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