Cluster: HRGMv2_1721_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1721
- CGC Family ID: CGCFAM_07940
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1721_1 | HRGMv2_1721_1_1659 | 1862563 | 1864320 | - | 2.A.21.9.1 |
| pfam | HRGMv2_1721_1 | HRGMv2_1721_1_1660 | 1864689 | 1865165 | + | Metal_resist |
| pfam | HRGMv2_1721_1 | HRGMv2_1721_1_1661 | 1865362 | 1865838 | + | Metal_resist |
| CAZyme | HRGMv2_1721_1 | HRGMv2_1721_1_1662 | 1866162 | 1867388 | - | GH102 |
| TC | HRGMv2_1721_1 | HRGMv2_1721_1_1663 | 1867633 | 1868973 | + | 2.A.25.1.9 |
Gene ID: HRGMv2_1721_1_1659
Type: TC
Location: 1862563 - 1864320 (-)
Type: TC
Location: 1862563 - 1864320 (-)
Gene ID: HRGMv2_1721_1_1660
Type: pfam
Location: 1864689 - 1865165 (+)
Type: pfam
Location: 1864689 - 1865165 (+)
Gene ID: HRGMv2_1721_1_1661
Type: pfam
Location: 1865362 - 1865838 (+)
Type: pfam
Location: 1865362 - 1865838 (+)
Gene ID: HRGMv2_1721_1_1662
Type: CAZyme
Location: 1866162 - 1867388 (-)
Type: CAZyme
Location: 1866162 - 1867388 (-)
Gene ID: HRGMv2_1721_1_1663
Type: TC
Location: 1867633 - 1868973 (+)
Type: TC
Location: 1867633 - 1868973 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Bilophila
Species
Bilophila wadsworthia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1721_1_1661 | vegan > omnivore | 1.01962 | 0.01153 |