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Cluster: HRGMv2_1721_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1721_1 HRGMv2_1721_1_1577 1766170 1767063 + 3.A.1.4.10
TC HRGMv2_1721_1 HRGMv2_1721_1_1578 1767060 1768103 + 3.A.1.4.10
TC HRGMv2_1721_1 HRGMv2_1721_1_1579 1768100 1768897 + 3.A.1.4.10
TC HRGMv2_1721_1 HRGMv2_1721_1_1580 1768890 1769621 + 3.A.1.4.10
pfam HRGMv2_1721_1 HRGMv2_1721_1_1581 1769688 1770515 - FdhE_central
TC HRGMv2_1721_1 HRGMv2_1721_1_1582 1770872 1771516 - 5.A.3.2.1
TC HRGMv2_1721_1 HRGMv2_1721_1_1583 1771528 1773942 - 5.A.3.2.1
pfam HRGMv2_1721_1 HRGMv2_1721_1_1584 1773991 1774572 - Molybdop_Fe4S4
TC HRGMv2_1721_1 HRGMv2_1721_1_1585 1775430 1777025 - 9.B.34.1.3
CAZyme HRGMv2_1721_1 HRGMv2_1721_1_1586 1777357 1777998 - GT51
Gene ID: HRGMv2_1721_1_1577
Type: TC
Location: 1766170 - 1767063 (+)
Gene ID: HRGMv2_1721_1_1578
Type: TC
Location: 1767060 - 1768103 (+)
Gene ID: HRGMv2_1721_1_1579
Type: TC
Location: 1768100 - 1768897 (+)
Gene ID: HRGMv2_1721_1_1580
Type: TC
Location: 1768890 - 1769621 (+)
Gene ID: HRGMv2_1721_1_1581
Type: pfam
Location: 1769688 - 1770515 (-)
Gene ID: HRGMv2_1721_1_1582
Type: TC
Location: 1770872 - 1771516 (-)
Gene ID: HRGMv2_1721_1_1583
Type: TC
Location: 1771528 - 1773942 (-)
Gene ID: HRGMv2_1721_1_1584
Type: pfam
Location: 1773991 - 1774572 (-)
Gene ID: HRGMv2_1721_1_1585
Type: TC
Location: 1775430 - 1777025 (-)
Gene ID: HRGMv2_1721_1_1586
Type: CAZyme
Location: 1777357 - 1777998 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1721_1_1584 vegan > omnivore 1.11421 0.01153

🧭 Explore Read Mapping of CGC

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