Cluster: HRGMv2_1720_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1720
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1720_16 | HRGMv2_1720_16_4 | 4214 | 5122 | + | GT2 |
| CAZyme | HRGMv2_1720_16 | HRGMv2_1720_16_5 | 5176 | 7047 | - | GT2 |
| TC | HRGMv2_1720_16 | HRGMv2_1720_16_6 | 7386 | 8165 | + | 3.A.1.103.6 |
| TC | HRGMv2_1720_16 | HRGMv2_1720_16_7 | 8175 | 9992 | + | 3.A.1.103.5 |
| pfam | HRGMv2_1720_16 | HRGMv2_1720_16_8 | 10078 | 12081 | - | DUF6541 |
| CAZyme | HRGMv2_1720_16 | HRGMv2_1720_16_9 | 12117 | 13994 | - | GT111 |
Gene ID: HRGMv2_1720_16_4
Type: CAZyme
Location: 4214 - 5122 (+)
Type: CAZyme
Location: 4214 - 5122 (+)
Gene ID: HRGMv2_1720_16_5
Type: CAZyme
Location: 5176 - 7047 (-)
Type: CAZyme
Location: 5176 - 7047 (-)
Gene ID: HRGMv2_1720_16_6
Type: TC
Location: 7386 - 8165 (+)
Type: TC
Location: 7386 - 8165 (+)
Gene ID: HRGMv2_1720_16_7
Type: TC
Location: 8175 - 9992 (+)
Type: TC
Location: 8175 - 9992 (+)
Gene ID: HRGMv2_1720_16_8
Type: pfam
Location: 10078 - 12081 (-)
Type: pfam
Location: 10078 - 12081 (-)
Gene ID: HRGMv2_1720_16_9
Type: CAZyme
Location: 12117 - 13994 (-)
Type: CAZyme
Location: 12117 - 13994 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Anaerotardibacter
Species
Anaerotardibacter sp958410215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.