Cluster: HRGMv2_1718_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1718
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1718_17 | HRGMv2_1718_17_26 | 27989 | 29089 | - | GT28 |
| TC | HRGMv2_1718_17 | HRGMv2_1718_17_27 | 29093 | 30355 | - | 2.A.103.1.3 |
| pfam | HRGMv2_1718_17 | HRGMv2_1718_17_28 | 30363 | 31883 | - | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_1718_17 | HRGMv2_1718_17_29 | 31887 | 32933 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_1718_17_26
Type: CAZyme
Location: 27989 - 29089 (-)
Type: CAZyme
Location: 27989 - 29089 (-)
Gene ID: HRGMv2_1718_17_27
Type: TC
Location: 29093 - 30355 (-)
Type: TC
Location: 29093 - 30355 (-)
Gene ID: HRGMv2_1718_17_28
Type: pfam
Location: 30363 - 31883 (-)
Type: pfam
Location: 30363 - 31883 (-)
Gene ID: HRGMv2_1718_17_29
Type: TC
Location: 31887 - 32933 (-)
Type: TC
Location: 31887 - 32933 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Gordonibacter
Species
Gordonibacter avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.