Cluster: HRGMv2_1717_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_1717
- CGC Family ID: CGCFAM_00008
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1717_11 | HRGMv2_1717_11_41 | 40906 | 41964 | - | GT2 |
| CAZyme | HRGMv2_1717_11 | HRGMv2_1717_11_42 | 41968 | 43080 | - | GT2 |
| CAZyme | HRGMv2_1717_11 | HRGMv2_1717_11_43 | 43118 | 44185 | - | GT2 |
| CAZyme | HRGMv2_1717_11 | HRGMv2_1717_11_44 | 44188 | 45345 | - | GT2 |
| TC | HRGMv2_1717_11 | HRGMv2_1717_11_45 | 45350 | 46153 | - | 3.A.1.103.1 |
| TC | HRGMv2_1717_11 | HRGMv2_1717_11_46 | 46163 | 47014 | - | 3.A.1.103.6 |
Gene ID: HRGMv2_1717_11_41
Type: CAZyme
Location: 40906 - 41964 (-)
Type: CAZyme
Location: 40906 - 41964 (-)
Gene ID: HRGMv2_1717_11_42
Type: CAZyme
Location: 41968 - 43080 (-)
Type: CAZyme
Location: 41968 - 43080 (-)
Gene ID: HRGMv2_1717_11_43
Type: CAZyme
Location: 43118 - 44185 (-)
Type: CAZyme
Location: 43118 - 44185 (-)
Gene ID: HRGMv2_1717_11_44
Type: CAZyme
Location: 44188 - 45345 (-)
Type: CAZyme
Location: 44188 - 45345 (-)
Gene ID: HRGMv2_1717_11_45
Type: TC
Location: 45350 - 46153 (-)
Type: TC
Location: 45350 - 46153 (-)
Gene ID: HRGMv2_1717_11_46
Type: TC
Location: 46163 - 47014 (-)
Type: TC
Location: 46163 - 47014 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Coprovicinus
Species
Coprovicinus avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.