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Cluster: HRGMv2_1717_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1717_1 HRGMv2_1717_1_96 104035 105528 - GH36
TC HRGMv2_1717_1 HRGMv2_1717_1_97 105658 106506 - 3.A.1.1.28
TC HRGMv2_1717_1 HRGMv2_1717_1_98 106506 107375 - 3.A.1.1.28
TC HRGMv2_1717_1 HRGMv2_1717_1_99 107388 108707 - 3.A.1.1.28
TC HRGMv2_1717_1 HRGMv2_1717_1_100 108729 109838 - 3.A.1.1.26
TF HRGMv2_1717_1 HRGMv2_1717_1_101 110259 111113 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_1717_1 HRGMv2_1717_1_102 111136 113034 - GH13_4
Gene ID: HRGMv2_1717_1_96
Type: CAZyme
Location: 104035 - 105528 (-)
Gene ID: HRGMv2_1717_1_97
Type: TC
Location: 105658 - 106506 (-)
Gene ID: HRGMv2_1717_1_98
Type: TC
Location: 106506 - 107375 (-)
Gene ID: HRGMv2_1717_1_99
Type: TC
Location: 107388 - 108707 (-)
Gene ID: HRGMv2_1717_1_100
Type: TC
Location: 108729 - 109838 (-)
Gene ID: HRGMv2_1717_1_101
Type: TF
Location: 110259 - 111113 (+)
Gene ID: HRGMv2_1717_1_102
Type: CAZyme
Location: 111136 - 113034 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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