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Cluster: HRGMv2_1717_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1717_1 HRGMv2_1717_1_57 59667 60599 - CE8
CAZyme HRGMv2_1717_1 HRGMv2_1717_1_58 60592 62442 - CE8
STP HRGMv2_1717_1 HRGMv2_1717_1_59 62632 64053 - Pribosyltran
pfam HRGMv2_1717_1 HRGMv2_1717_1_60 64063 64494 - DZR | PLDc_N
TC HRGMv2_1717_1 HRGMv2_1717_1_61 64662 65624 - 3.A.1.5.12
TC HRGMv2_1717_1 HRGMv2_1717_1_62 65627 66613 - 3.A.1.5.29
TC HRGMv2_1717_1 HRGMv2_1717_1_63 66616 67494 - 3.A.1.5.20
TC HRGMv2_1717_1 HRGMv2_1717_1_64 67506 68441 - 3.A.1.5.20
peptidase HRGMv2_1717_1 HRGMv2_1717_1_65 68444 69520 - S12.UPW
peptidase HRGMv2_1717_1 HRGMv2_1717_1_66 69529 70758 - M38.UNW
TC HRGMv2_1717_1 HRGMv2_1717_1_67 71222 72475 - 3.A.1.5.20
Gene ID: HRGMv2_1717_1_57
Type: CAZyme
Location: 59667 - 60599 (-)
Gene ID: HRGMv2_1717_1_58
Type: CAZyme
Location: 60592 - 62442 (-)
Gene ID: HRGMv2_1717_1_59
Type: STP
Location: 62632 - 64053 (-)
Gene ID: HRGMv2_1717_1_60
Type: pfam
Location: 64063 - 64494 (-)
Gene ID: HRGMv2_1717_1_61
Type: TC
Location: 64662 - 65624 (-)
Gene ID: HRGMv2_1717_1_62
Type: TC
Location: 65627 - 66613 (-)
Gene ID: HRGMv2_1717_1_63
Type: TC
Location: 66616 - 67494 (-)
Gene ID: HRGMv2_1717_1_64
Type: TC
Location: 67506 - 68441 (-)
Gene ID: HRGMv2_1717_1_65
Type: peptidase
Location: 68444 - 69520 (-)
Gene ID: HRGMv2_1717_1_66
Type: peptidase
Location: 69529 - 70758 (-)
Gene ID: HRGMv2_1717_1_67
Type: TC
Location: 71222 - 72475 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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