dbCAN Logo

Cluster: HRGMv2_1716_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1716_1 HRGMv2_1716_1_194 224616 225866 - GT28
TC HRGMv2_1716_1 HRGMv2_1716_1_195 226172 227851 - 2.A.14.1.2
sulfatase HRGMv2_1716_1 HRGMv2_1716_1_196 227977 228819 - S1_4
TC HRGMv2_1716_1 HRGMv2_1716_1_197 228956 230485 - 2.A.25.1.5
TF HRGMv2_1716_1 HRGMv2_1716_1_198 230643 231092 + MerR
TC HRGMv2_1716_1 HRGMv2_1716_1_199 231103 233478 - 9.A.8.1.6
Gene ID: HRGMv2_1716_1_194
Type: CAZyme
Location: 224616 - 225866 (-)
Gene ID: HRGMv2_1716_1_195
Type: TC
Location: 226172 - 227851 (-)
Gene ID: HRGMv2_1716_1_196
Type: sulfatase
Location: 227977 - 228819 (-)
Gene ID: HRGMv2_1716_1_197
Type: TC
Location: 228956 - 230485 (-)
Gene ID: HRGMv2_1716_1_198
Type: TF
Location: 230643 - 231092 (+)
Gene ID: HRGMv2_1716_1_199
Type: TC
Location: 231103 - 233478 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List