Cluster: HRGMv2_1715_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1715
- CGC Family ID: CGCFAM_01443
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1715_18 | HRGMv2_1715_18_208 | 243151 | 244293 | - | 2.A.45.2.6 |
| pfam | HRGMv2_1715_18 | HRGMv2_1715_18_209 | 244635 | 245066 | + | EIIA-man |
| TC | HRGMv2_1715_18 | HRGMv2_1715_18_210 | 245113 | 245616 | + | 4.A.6.1.9 |
| TC | HRGMv2_1715_18 | HRGMv2_1715_18_211 | 245715 | 246578 | + | 4.A.6.1.16 |
| TC | HRGMv2_1715_18 | HRGMv2_1715_18_212 | 246578 | 247429 | + | 4.A.6.1.6 |
| NULL(UNKNOWN) | HRGMv2_1715_18 | HRGMv2_1715_18_213 | 247530 | 247904 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1715_18 | HRGMv2_1715_18_214 | 247965 | 252452 | + | CBM66 | CBM66 | GH32 |
Gene ID: HRGMv2_1715_18_208
Type: TC
Location: 243151 - 244293 (-)
Type: TC
Location: 243151 - 244293 (-)
Gene ID: HRGMv2_1715_18_209
Type: pfam
Location: 244635 - 245066 (+)
Type: pfam
Location: 244635 - 245066 (+)
Gene ID: HRGMv2_1715_18_210
Type: TC
Location: 245113 - 245616 (+)
Type: TC
Location: 245113 - 245616 (+)
Gene ID: HRGMv2_1715_18_211
Type: TC
Location: 245715 - 246578 (+)
Type: TC
Location: 245715 - 246578 (+)
Gene ID: HRGMv2_1715_18_212
Type: TC
Location: 246578 - 247429 (+)
Type: TC
Location: 246578 - 247429 (+)
Gene ID: HRGMv2_1715_18_213
Type:
Location: 247530 - 247904 (+)
Type:
Location: 247530 - 247904 (+)
Gene ID: HRGMv2_1715_18_214
Type: CAZyme
Location: 247965 - 252452 (+)
Type: CAZyme
Location: 247965 - 252452 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Thermophilibacter
Species
Thermophilibacter provencensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.