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Cluster: HRGMv2_1715_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1715_13 HRGMv2_1715_13_15 15584 16423 - 3.A.1.24.5
TC HRGMv2_1715_13 HRGMv2_1715_13_16 16485 17165 - 3.A.1.24.5
TC HRGMv2_1715_13 HRGMv2_1715_13_17 17158 17907 - 3.A.1.24.1
NULL(UNKNOWN) HRGMv2_1715_13 HRGMv2_1715_13_18 17986 18099 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1715_13 HRGMv2_1715_13_19 18197 18565 - 9.B.55.2.1
NULL(UNKNOWN) HRGMv2_1715_13 HRGMv2_1715_13_20 18730 19338 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_1715_13 HRGMv2_1715_13_21 19488 19973 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1715_13 HRGMv2_1715_13_22 20086 20763 + 1.C.113.1.1
peptidase HRGMv2_1715_13 HRGMv2_1715_13_23 20982 22403 + M20.UPA
CAZyme HRGMv2_1715_13 HRGMv2_1715_13_24 22463 23986 - GH13_5
Gene ID: HRGMv2_1715_13_15
Type: TC
Location: 15584 - 16423 (-)
Gene ID: HRGMv2_1715_13_16
Type: TC
Location: 16485 - 17165 (-)
Gene ID: HRGMv2_1715_13_17
Type: TC
Location: 17158 - 17907 (-)
Gene ID: HRGMv2_1715_13_18
Type:
Location: 17986 - 18099 (-)
Gene ID: HRGMv2_1715_13_19
Type: TC
Location: 18197 - 18565 (-)
Gene ID: HRGMv2_1715_13_20
Type:
Location: 18730 - 19338 (-)
Gene ID: HRGMv2_1715_13_21
Type:
Location: 19488 - 19973 (-)
Gene ID: HRGMv2_1715_13_22
Type: TC
Location: 20086 - 20763 (+)
Gene ID: HRGMv2_1715_13_23
Type: peptidase
Location: 20982 - 22403 (+)
Gene ID: HRGMv2_1715_13_24
Type: CAZyme
Location: 22463 - 23986 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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