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Cluster: HRGMv2_1715_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1715_37 HRGMv2_1715_37_30 38638 40443 + GH35
TC HRGMv2_1715_37 HRGMv2_1715_37_31 40445 40909 + 4.A.6.1.18
TC HRGMv2_1715_37 HRGMv2_1715_37_32 41007 41897 + 4.A.6.1.18
TC HRGMv2_1715_37 HRGMv2_1715_37_33 41887 42708 + 4.A.6.1.18
NULL(UNKNOWN) HRGMv2_1715_37 HRGMv2_1715_37_34 42864 43481 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1715_37 HRGMv2_1715_37_35 43580 44014 + 4.A.6.1.1
TF HRGMv2_1715_37 HRGMv2_1715_37_36 44069 44800 + GntR
STP HRGMv2_1715_37 HRGMv2_1715_37_37 44893 46059 + SIS | SIS
CAZyme HRGMv2_1715_37 HRGMv2_1715_37_38 46217 47383 + CE9
Gene ID: HRGMv2_1715_37_30
Type: CAZyme
Location: 38638 - 40443 (+)
Gene ID: HRGMv2_1715_37_31
Type: TC
Location: 40445 - 40909 (+)
Gene ID: HRGMv2_1715_37_32
Type: TC
Location: 41007 - 41897 (+)
Gene ID: HRGMv2_1715_37_33
Type: TC
Location: 41887 - 42708 (+)
Gene ID: HRGMv2_1715_37_34
Type:
Location: 42864 - 43481 (+)
Gene ID: HRGMv2_1715_37_35
Type: TC
Location: 43580 - 44014 (+)
Gene ID: HRGMv2_1715_37_36
Type: TF
Location: 44069 - 44800 (+)
Gene ID: HRGMv2_1715_37_37
Type: STP
Location: 44893 - 46059 (+)
Gene ID: HRGMv2_1715_37_38
Type: CAZyme
Location: 46217 - 47383 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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