Cluster: HRGMv2_1715_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1715
- CGC Family ID: CGCFAM_09828
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1715_8 | HRGMv2_1715_8_38 | 46789 | 48093 | + | GT2 |
| TC | HRGMv2_1715_8 | HRGMv2_1715_8_39 | 48263 | 49876 | + | 3.A.1.1.1 |
| TC | HRGMv2_1715_8 | HRGMv2_1715_8_40 | 49963 | 51552 | + | 3.A.1.19.3 |
Gene ID: HRGMv2_1715_8_38
Type: CAZyme
Location: 46789 - 48093 (+)
Type: CAZyme
Location: 46789 - 48093 (+)
Gene ID: HRGMv2_1715_8_39
Type: TC
Location: 48263 - 49876 (+)
Type: TC
Location: 48263 - 49876 (+)
Gene ID: HRGMv2_1715_8_40
Type: TC
Location: 49963 - 51552 (+)
Type: TC
Location: 49963 - 51552 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Thermophilibacter
Species
Thermophilibacter provencensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1715_8_38 | vegetarian > vegan | 1.12482 | 0.00566 |