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Cluster: HRGMv2_1715_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1715_25 HRGMv2_1715_25_13 19183 20739 + GH77
CAZyme HRGMv2_1715_25 HRGMv2_1715_25_14 20811 23075 + GT35
CAZyme HRGMv2_1715_25 HRGMv2_1715_25_15 23131 24822 + GH13_30
CAZyme HRGMv2_1715_25 HRGMv2_1715_25_16 25044 27236 - GH36
TC HRGMv2_1715_25 HRGMv2_1715_25_17 27390 28247 - 3.A.1.1.28
TC HRGMv2_1715_25 HRGMv2_1715_25_18 28247 29116 - 3.A.1.1.28
TC HRGMv2_1715_25 HRGMv2_1715_25_19 29129 30418 - 3.A.1.1.28
TC HRGMv2_1715_25 HRGMv2_1715_25_20 30437 31552 - 3.A.1.1.26
Gene ID: HRGMv2_1715_25_13
Type: CAZyme
Location: 19183 - 20739 (+)
Gene ID: HRGMv2_1715_25_14
Type: CAZyme
Location: 20811 - 23075 (+)
Gene ID: HRGMv2_1715_25_15
Type: CAZyme
Location: 23131 - 24822 (+)
Gene ID: HRGMv2_1715_25_16
Type: CAZyme
Location: 25044 - 27236 (-)
Gene ID: HRGMv2_1715_25_17
Type: TC
Location: 27390 - 28247 (-)
Gene ID: HRGMv2_1715_25_18
Type: TC
Location: 28247 - 29116 (-)
Gene ID: HRGMv2_1715_25_19
Type: TC
Location: 29129 - 30418 (-)
Gene ID: HRGMv2_1715_25_20
Type: TC
Location: 30437 - 31552 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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