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Cluster: HRGMv2_1715_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1715_23 HRGMv2_1715_23_70 78175 79968 + GH154
TF HRGMv2_1715_23 HRGMv2_1715_23_71 80096 81157 - LacI
pfam HRGMv2_1715_23 HRGMv2_1715_23_72 81297 81938 - LacAB_rpiB | DUF3666
CAZyme HRGMv2_1715_23 HRGMv2_1715_23_73 82208 83395 + GH88
TC HRGMv2_1715_23 HRGMv2_1715_23_74 83405 83899 + 4.A.6.1.14
TC HRGMv2_1715_23 HRGMv2_1715_23_75 83970 84758 + 4.A.6.1.14
TC HRGMv2_1715_23 HRGMv2_1715_23_76 84745 85569 + 4.A.6.1.14
CAZyme HRGMv2_1715_23 HRGMv2_1715_23_77 85717 87696 + PL12_1
Gene ID: HRGMv2_1715_23_70
Type: CAZyme
Location: 78175 - 79968 (+)
Gene ID: HRGMv2_1715_23_71
Type: TF
Location: 80096 - 81157 (-)
Gene ID: HRGMv2_1715_23_72
Type: pfam
Location: 81297 - 81938 (-)
Gene ID: HRGMv2_1715_23_73
Type: CAZyme
Location: 82208 - 83395 (+)
Gene ID: HRGMv2_1715_23_74
Type: TC
Location: 83405 - 83899 (+)
Gene ID: HRGMv2_1715_23_75
Type: TC
Location: 83970 - 84758 (+)
Gene ID: HRGMv2_1715_23_76
Type: TC
Location: 84745 - 85569 (+)
Gene ID: HRGMv2_1715_23_77
Type: CAZyme
Location: 85717 - 87696 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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