Cluster: HRGMv2_1715_CGC11
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_1715
- CGC Family ID: CGCFAM_09025
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1715_19 | HRGMv2_1715_19_132 | 156613 | 156966 | + | 2.A.7.33.5 |
| CAZyme | HRGMv2_1715_19 | HRGMv2_1715_19_133 | 156993 | 157928 | + | GT2 |
| pfam | HRGMv2_1715_19 | HRGMv2_1715_19_134 | 158145 | 159257 | - | Acyl_transf_3 |
| pfam | HRGMv2_1715_19 | HRGMv2_1715_19_135 | 159268 | 160419 | - | ATPgrasp_ST |
| TC | HRGMv2_1715_19 | HRGMv2_1715_19_136 | 160530 | 161990 | + | 2.A.66.2.23 |
| STP | HRGMv2_1715_19 | HRGMv2_1715_19_137 | 162035 | 163147 | + | Aminotran_1_2 |
| CAZyme | HRGMv2_1715_19 | HRGMv2_1715_19_138 | 163151 | 164113 | + | GT2 |
| CAZyme | HRGMv2_1715_19 | HRGMv2_1715_19_139 | 164129 | 164920 | - | GT2 |
| pfam | HRGMv2_1715_19 | HRGMv2_1715_19_140 | 164929 | 165282 | - | DUF2304 |
| CAZyme | HRGMv2_1715_19 | HRGMv2_1715_19_141 | 165292 | 165975 | - | GT2 |
Gene ID: HRGMv2_1715_19_132
Type: TC
Location: 156613 - 156966 (+)
Type: TC
Location: 156613 - 156966 (+)
Gene ID: HRGMv2_1715_19_133
Type: CAZyme
Location: 156993 - 157928 (+)
Type: CAZyme
Location: 156993 - 157928 (+)
Gene ID: HRGMv2_1715_19_134
Type: pfam
Location: 158145 - 159257 (-)
Type: pfam
Location: 158145 - 159257 (-)
Gene ID: HRGMv2_1715_19_135
Type: pfam
Location: 159268 - 160419 (-)
Type: pfam
Location: 159268 - 160419 (-)
Gene ID: HRGMv2_1715_19_136
Type: TC
Location: 160530 - 161990 (+)
Type: TC
Location: 160530 - 161990 (+)
Gene ID: HRGMv2_1715_19_137
Type: STP
Location: 162035 - 163147 (+)
Type: STP
Location: 162035 - 163147 (+)
Gene ID: HRGMv2_1715_19_138
Type: CAZyme
Location: 163151 - 164113 (+)
Type: CAZyme
Location: 163151 - 164113 (+)
Gene ID: HRGMv2_1715_19_139
Type: CAZyme
Location: 164129 - 164920 (-)
Type: CAZyme
Location: 164129 - 164920 (-)
Gene ID: HRGMv2_1715_19_140
Type: pfam
Location: 164929 - 165282 (-)
Type: pfam
Location: 164929 - 165282 (-)
Gene ID: HRGMv2_1715_19_141
Type: CAZyme
Location: 165292 - 165975 (-)
Type: CAZyme
Location: 165292 - 165975 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Thermophilibacter
Species
Thermophilibacter provencensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.