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Cluster: HRGMv2_1705_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1705_4 HRGMv2_1705_4_136 145198 146364 - CE9
STP HRGMv2_1705_4 HRGMv2_1705_4_137 146432 147598 - SIS
TF HRGMv2_1705_4 HRGMv2_1705_4_138 147627 148355 - GntR
TC HRGMv2_1705_4 HRGMv2_1705_4_139 148518 149597 - 4.A.6.1.4
TC HRGMv2_1705_4 HRGMv2_1705_4_140 149587 150387 - 4.A.6.1.4
TC HRGMv2_1705_4 HRGMv2_1705_4_141 150472 150954 - 4.A.6.1.4
pfam HRGMv2_1705_4 HRGMv2_1705_4_142 151027 151311 - YajC
TC HRGMv2_1705_4 HRGMv2_1705_4_143 151311 151745 - 4.A.6.1.10
Gene ID: HRGMv2_1705_4_136
Type: CAZyme
Location: 145198 - 146364 (-)
Gene ID: HRGMv2_1705_4_137
Type: STP
Location: 146432 - 147598 (-)
Gene ID: HRGMv2_1705_4_138
Type: TF
Location: 147627 - 148355 (-)
Gene ID: HRGMv2_1705_4_139
Type: TC
Location: 148518 - 149597 (-)
Gene ID: HRGMv2_1705_4_140
Type: TC
Location: 149587 - 150387 (-)
Gene ID: HRGMv2_1705_4_141
Type: TC
Location: 150472 - 150954 (-)
Gene ID: HRGMv2_1705_4_142
Type: pfam
Location: 151027 - 151311 (-)
Gene ID: HRGMv2_1705_4_143
Type: TC
Location: 151311 - 151745 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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