Cluster: HRGMv2_1705_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1705
- CGC Family ID: CGCFAM_06052
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1705_1 | HRGMv2_1705_1_112 | 119804 | 121720 | + | GH13_4 |
| NULL(UNKNOWN) | HRGMv2_1705_1 | HRGMv2_1705_1_113 | 121734 | 122267 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_1705_1 | HRGMv2_1705_1_114 | 122350 | 123261 | - | HTH_1 |
| TC | HRGMv2_1705_1 | HRGMv2_1705_1_115 | 123377 | 125698 | + | 3.A.3.3.4 |
| pfam | HRGMv2_1705_1 | HRGMv2_1705_1_116 | 125737 | 129342 | - | FtsX | FtsX |
| TC | HRGMv2_1705_1 | HRGMv2_1705_1_117 | 129356 | 130057 | - | 3.A.1.122.14 |
Gene ID: HRGMv2_1705_1_112
Type: CAZyme
Location: 119804 - 121720 (+)
Type: CAZyme
Location: 119804 - 121720 (+)
Gene ID: HRGMv2_1705_1_113
Type:
Location: 121734 - 122267 (-)
Type:
Location: 121734 - 122267 (-)
Gene ID: HRGMv2_1705_1_114
Type: TF
Location: 122350 - 123261 (-)
Type: TF
Location: 122350 - 123261 (-)
Gene ID: HRGMv2_1705_1_115
Type: TC
Location: 123377 - 125698 (+)
Type: TC
Location: 123377 - 125698 (+)
Gene ID: HRGMv2_1705_1_116
Type: pfam
Location: 125737 - 129342 (-)
Type: pfam
Location: 125737 - 129342 (-)
Gene ID: HRGMv2_1705_1_117
Type: TC
Location: 129356 - 130057 (-)
Type: TC
Location: 129356 - 130057 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Thermophilibacter
Species
Thermophilibacter timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.