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Cluster: HRGMv2_1705_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1705_6 HRGMv2_1705_6_92 116994 117833 - 3.A.1.24.5
TC HRGMv2_1705_6 HRGMv2_1705_6_93 117888 118571 - 3.A.1.24.5
TC HRGMv2_1705_6 HRGMv2_1705_6_94 118564 119313 - 3.A.1.24.1
pfam HRGMv2_1705_6 HRGMv2_1705_6_95 119574 120185 - TM7S3_TM198
NULL(UNKNOWN) HRGMv2_1705_6 HRGMv2_1705_6_96 120196 120672 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1705_6 HRGMv2_1705_6_97 120770 121450 + 1.C.113.1.1
peptidase HRGMv2_1705_6 HRGMv2_1705_6_98 121664 123082 + M20.UPA
CAZyme HRGMv2_1705_6 HRGMv2_1705_6_99 123197 124720 - GH13_5
NULL(UNKNOWN) HRGMv2_1705_6 HRGMv2_1705_6_100 124717 125658 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1705_6 HRGMv2_1705_6_101 126110 126592 - 4.A.1.2.6
CAZyme HRGMv2_1705_6 HRGMv2_1705_6_102 126634 128082 - GH1
TC HRGMv2_1705_6 HRGMv2_1705_6_103 128088 129473 - 4.A.1.2.11
Gene ID: HRGMv2_1705_6_92
Type: TC
Location: 116994 - 117833 (-)
Gene ID: HRGMv2_1705_6_93
Type: TC
Location: 117888 - 118571 (-)
Gene ID: HRGMv2_1705_6_94
Type: TC
Location: 118564 - 119313 (-)
Gene ID: HRGMv2_1705_6_95
Type: pfam
Location: 119574 - 120185 (-)
Gene ID: HRGMv2_1705_6_96
Type:
Location: 120196 - 120672 (-)
Gene ID: HRGMv2_1705_6_97
Type: TC
Location: 120770 - 121450 (+)
Gene ID: HRGMv2_1705_6_98
Type: peptidase
Location: 121664 - 123082 (+)
Gene ID: HRGMv2_1705_6_99
Type: CAZyme
Location: 123197 - 124720 (-)
Gene ID: HRGMv2_1705_6_100
Type:
Location: 124717 - 125658 (-)
Gene ID: HRGMv2_1705_6_101
Type: TC
Location: 126110 - 126592 (-)
Gene ID: HRGMv2_1705_6_102
Type: CAZyme
Location: 126634 - 128082 (-)
Gene ID: HRGMv2_1705_6_103
Type: TC
Location: 128088 - 129473 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1705_6_97 vegetarian > vegan 2.76332 0.00701

🧭 Explore Read Mapping of CGC

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