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Cluster: HRGMv2_1705_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1705_6 HRGMv2_1705_6_59 72591 74120 + GH77
CAZyme HRGMv2_1705_6 HRGMv2_1705_6_60 74123 76387 + GT35
CAZyme HRGMv2_1705_6 HRGMv2_1705_6_61 76465 78171 + GH13_30
CAZyme HRGMv2_1705_6 HRGMv2_1705_6_62 78426 80615 - GH36
TC HRGMv2_1705_6 HRGMv2_1705_6_63 80752 81609 - 3.A.1.1.28
TC HRGMv2_1705_6 HRGMv2_1705_6_64 81609 82478 - 3.A.1.1.28
TC HRGMv2_1705_6 HRGMv2_1705_6_65 82494 83783 - 3.A.1.1.28
TC HRGMv2_1705_6 HRGMv2_1705_6_66 83802 84917 - 3.A.1.1.26
Gene ID: HRGMv2_1705_6_59
Type: CAZyme
Location: 72591 - 74120 (+)
Gene ID: HRGMv2_1705_6_60
Type: CAZyme
Location: 74123 - 76387 (+)
Gene ID: HRGMv2_1705_6_61
Type: CAZyme
Location: 76465 - 78171 (+)
Gene ID: HRGMv2_1705_6_62
Type: CAZyme
Location: 78426 - 80615 (-)
Gene ID: HRGMv2_1705_6_63
Type: TC
Location: 80752 - 81609 (-)
Gene ID: HRGMv2_1705_6_64
Type: TC
Location: 81609 - 82478 (-)
Gene ID: HRGMv2_1705_6_65
Type: TC
Location: 82494 - 83783 (-)
Gene ID: HRGMv2_1705_6_66
Type: TC
Location: 83802 - 84917 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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