Cluster: HRGMv2_1698_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_1698
- CGC Family ID: CGCFAM_00348
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1698_1 | HRGMv2_1698_1_1525 | 1800451 | 1801173 | + | GT111 |
| CAZyme | HRGMv2_1698_1 | HRGMv2_1698_1_1526 | 1801198 | 1802295 | + | GT113 |
| CAZyme | HRGMv2_1698_1 | HRGMv2_1698_1_1527 | 1802309 | 1803463 | - | GT4 |
| CAZyme | HRGMv2_1698_1 | HRGMv2_1698_1_1528 | 1803496 | 1804416 | - | GT2 |
| TC | HRGMv2_1698_1 | HRGMv2_1698_1_1529 | 1804484 | 1805932 | - | 2.A.66.2.16 |
| NULL(UNKNOWN) | HRGMv2_1698_1 | HRGMv2_1698_1_1530 | 1806031 | 1807275 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1698_1 | HRGMv2_1698_1_1531 | 1807285 | 1808160 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_1698_1_1525
Type: CAZyme
Location: 1800451 - 1801173 (+)
Type: CAZyme
Location: 1800451 - 1801173 (+)
Gene ID: HRGMv2_1698_1_1526
Type: CAZyme
Location: 1801198 - 1802295 (+)
Type: CAZyme
Location: 1801198 - 1802295 (+)
Gene ID: HRGMv2_1698_1_1527
Type: CAZyme
Location: 1802309 - 1803463 (-)
Type: CAZyme
Location: 1802309 - 1803463 (-)
Gene ID: HRGMv2_1698_1_1528
Type: CAZyme
Location: 1803496 - 1804416 (-)
Type: CAZyme
Location: 1803496 - 1804416 (-)
Gene ID: HRGMv2_1698_1_1529
Type: TC
Location: 1804484 - 1805932 (-)
Type: TC
Location: 1804484 - 1805932 (-)
Gene ID: HRGMv2_1698_1_1530
Type:
Location: 1806031 - 1807275 (+)
Type:
Location: 1806031 - 1807275 (+)
Gene ID: HRGMv2_1698_1_1531
Type: TC
Location: 1807285 - 1808160 (-)
Type: TC
Location: 1807285 - 1808160 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
QAMH01
Genus
QAMH01
Species
QAMH01 sp025992705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.