Cluster: HRGMv2_1698_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1698
- CGC Family ID: CGCFAM_09843
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1698_1 | HRGMv2_1698_1_1516 | 1784562 | 1786997 | + | 1.B.12.5.1 |
| peptidase | HRGMv2_1698_1 | HRGMv2_1698_1_1517 | 1787155 | 1791738 | + | S08.UPA |
| pfam | HRGMv2_1698_1 | HRGMv2_1698_1_1518 | 1791775 | 1792731 | - | Fic | Virulence_RhuM |
| CAZyme | HRGMv2_1698_1 | HRGMv2_1698_1_1519 | 1792841 | 1793824 | - | GT81 |
Gene ID: HRGMv2_1698_1_1516
Type: TC
Location: 1784562 - 1786997 (+)
Type: TC
Location: 1784562 - 1786997 (+)
Gene ID: HRGMv2_1698_1_1517
Type: peptidase
Location: 1787155 - 1791738 (+)
Type: peptidase
Location: 1787155 - 1791738 (+)
Gene ID: HRGMv2_1698_1_1518
Type: pfam
Location: 1791775 - 1792731 (-)
Type: pfam
Location: 1791775 - 1792731 (-)
Gene ID: HRGMv2_1698_1_1519
Type: CAZyme
Location: 1792841 - 1793824 (-)
Type: CAZyme
Location: 1792841 - 1793824 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
QAMH01
Genus
QAMH01
Species
QAMH01 sp025992705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.