Cluster: HRGMv2_1698_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1698
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1698_1 | HRGMv2_1698_1_872 | 1000317 | 1001354 | + | 9.B.146.1.6 |
| pfam | HRGMv2_1698_1 | HRGMv2_1698_1_873 | 1001371 | 1002729 | + | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_1698_1 | HRGMv2_1698_1_874 | 1002737 | 1004191 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_1698_1 | HRGMv2_1698_1_875 | 1004272 | 1005384 | + | GT28 |
Gene ID: HRGMv2_1698_1_872
Type: TC
Location: 1000317 - 1001354 (+)
Type: TC
Location: 1000317 - 1001354 (+)
Gene ID: HRGMv2_1698_1_873
Type: pfam
Location: 1001371 - 1002729 (+)
Type: pfam
Location: 1001371 - 1002729 (+)
Gene ID: HRGMv2_1698_1_874
Type: TC
Location: 1002737 - 1004191 (+)
Type: TC
Location: 1002737 - 1004191 (+)
Gene ID: HRGMv2_1698_1_875
Type: CAZyme
Location: 1004272 - 1005384 (+)
Type: CAZyme
Location: 1004272 - 1005384 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
QAMH01
Genus
QAMH01
Species
QAMH01 sp025992705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.