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Cluster: HRGMv2_1698_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1698_1 HRGMv2_1698_1_502 585236 587413 - GT51
STP HRGMv2_1698_1 HRGMv2_1698_1_503 587642 587809 + Fer4 | Fer4
pfam HRGMv2_1698_1 HRGMv2_1698_1_504 587894 589228 + tRNA_U5-meth_tr | tRNA_U5-meth_tr
TC HRGMv2_1698_1 HRGMv2_1698_1_505 589439 589969 + 3.D.1.8.1
STP HRGMv2_1698_1 HRGMv2_1698_1_506 590003 591679 + TPR_1 | TPR_1 | TPR_1
pfam HRGMv2_1698_1 HRGMv2_1698_1_507 591743 592144 + NDK
TC HRGMv2_1698_1 HRGMv2_1698_1_508 592331 593371 + 9.B.157.1.2
Gene ID: HRGMv2_1698_1_502
Type: CAZyme
Location: 585236 - 587413 (-)
Gene ID: HRGMv2_1698_1_503
Type: STP
Location: 587642 - 587809 (+)
Gene ID: HRGMv2_1698_1_504
Type: pfam
Location: 587894 - 589228 (+)
Gene ID: HRGMv2_1698_1_505
Type: TC
Location: 589439 - 589969 (+)
Gene ID: HRGMv2_1698_1_506
Type: STP
Location: 590003 - 591679 (+)
Gene ID: HRGMv2_1698_1_507
Type: pfam
Location: 591743 - 592144 (+)
Gene ID: HRGMv2_1698_1_508
Type: TC
Location: 592331 - 593371 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Actinomycetota
→
Class
Coriobacteriia
→
Order
Coriobacteriales
→
Family
QAMH01
→
Genus
QAMH01
→
Species
QAMH01 sp025992705

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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