Cluster: HRGMv2_1697_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1697
- CGC Family ID: CGCFAM_00008
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1697_29 | HRGMv2_1697_29_12 | 9180 | 9974 | + | 3.A.1.103.6 |
| TC | HRGMv2_1697_29 | HRGMv2_1697_29_13 | 9984 | 10775 | + | 3.A.1.103.1 |
| NULL(UNKNOWN) | HRGMv2_1697_29 | HRGMv2_1697_29_14 | 10772 | 10960 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1697_29 | HRGMv2_1697_29_15 | 10957 | 12165 | - | GT4 |
| CAZyme | HRGMv2_1697_29 | HRGMv2_1697_29_16 | 12183 | 13337 | - | GT2 |
Gene ID: HRGMv2_1697_29_12
Type: TC
Location: 9180 - 9974 (+)
Type: TC
Location: 9180 - 9974 (+)
Gene ID: HRGMv2_1697_29_13
Type: TC
Location: 9984 - 10775 (+)
Type: TC
Location: 9984 - 10775 (+)
Gene ID: HRGMv2_1697_29_14
Type:
Location: 10772 - 10960 (-)
Type:
Location: 10772 - 10960 (-)
Gene ID: HRGMv2_1697_29_15
Type: CAZyme
Location: 10957 - 12165 (-)
Type: CAZyme
Location: 10957 - 12165 (-)
Gene ID: HRGMv2_1697_29_16
Type: CAZyme
Location: 12183 - 13337 (-)
Type: CAZyme
Location: 12183 - 13337 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
QAMH01
Genus
QAMH01
Species
QAMH01 sp902493755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.