Cluster: HRGMv2_1697_CGC3
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1697
- CGC Family ID: CGCFAM_05848
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1697_6 | HRGMv2_1697_6_17 | 18107 | 19591 | - | CE4 |
| TC | HRGMv2_1697_6 | HRGMv2_1697_6_18 | 19615 | 21306 | - | 3.A.1.32.2 |
| STP | HRGMv2_1697_6 | HRGMv2_1697_6_19 | 21590 | 25132 | + | Fer4 | Fer4 |
| TC | HRGMv2_1697_6 | HRGMv2_1697_6_20 | 25279 | 26742 | - | 2.A.66.1.32 |
| CAZyme | HRGMv2_1697_6 | HRGMv2_1697_6_21 | 26921 | 28102 | + | GT4 |
| TC | HRGMv2_1697_6 | HRGMv2_1697_6_22 | 28257 | 29129 | - | 2.A.7.3.52 |
| TC | HRGMv2_1697_6 | HRGMv2_1697_6_23 | 29129 | 29869 | - | 3.A.1.3.15 |
| TC | HRGMv2_1697_6 | HRGMv2_1697_6_24 | 29869 | 31362 | - | 3.A.1.3.16 |
| TC | HRGMv2_1697_6 | HRGMv2_1697_6_25 | 31469 | 32293 | - | 3.A.1.3.10 |
| TC | HRGMv2_1697_6 | HRGMv2_1697_6_26 | 32393 | 33160 | - | 3.A.1.3.14 |
| TC | HRGMv2_1697_6 | HRGMv2_1697_6_27 | 33180 | 33836 | - | 3.A.1.3.12 |
| TC | HRGMv2_1697_6 | HRGMv2_1697_6_28 | 33930 | 34778 | - | 3.A.1.3.10 |
Gene ID: HRGMv2_1697_6_17
Type: CAZyme
Location: 18107 - 19591 (-)
Type: CAZyme
Location: 18107 - 19591 (-)
Gene ID: HRGMv2_1697_6_18
Type: TC
Location: 19615 - 21306 (-)
Type: TC
Location: 19615 - 21306 (-)
Gene ID: HRGMv2_1697_6_19
Type: STP
Location: 21590 - 25132 (+)
Type: STP
Location: 21590 - 25132 (+)
Gene ID: HRGMv2_1697_6_20
Type: TC
Location: 25279 - 26742 (-)
Type: TC
Location: 25279 - 26742 (-)
Gene ID: HRGMv2_1697_6_21
Type: CAZyme
Location: 26921 - 28102 (+)
Type: CAZyme
Location: 26921 - 28102 (+)
Gene ID: HRGMv2_1697_6_22
Type: TC
Location: 28257 - 29129 (-)
Type: TC
Location: 28257 - 29129 (-)
Gene ID: HRGMv2_1697_6_23
Type: TC
Location: 29129 - 29869 (-)
Type: TC
Location: 29129 - 29869 (-)
Gene ID: HRGMv2_1697_6_24
Type: TC
Location: 29869 - 31362 (-)
Type: TC
Location: 29869 - 31362 (-)
Gene ID: HRGMv2_1697_6_25
Type: TC
Location: 31469 - 32293 (-)
Type: TC
Location: 31469 - 32293 (-)
Gene ID: HRGMv2_1697_6_26
Type: TC
Location: 32393 - 33160 (-)
Type: TC
Location: 32393 - 33160 (-)
Gene ID: HRGMv2_1697_6_27
Type: TC
Location: 33180 - 33836 (-)
Type: TC
Location: 33180 - 33836 (-)
Gene ID: HRGMv2_1697_6_28
Type: TC
Location: 33930 - 34778 (-)
Type: TC
Location: 33930 - 34778 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
QAMH01
Genus
QAMH01
Species
QAMH01 sp902493755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.