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Cluster: HRGMv2_1697_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1697_4 HRGMv2_1697_4_64 75615 76310 - 9.B.120.1.4
TF HRGMv2_1697_4 HRGMv2_1697_4_65 76307 76777 - MerR
NULL(UNKNOWN) HRGMv2_1697_4 HRGMv2_1697_4_66 76956 77570 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1697_4 HRGMv2_1697_4_67 77691 79979 + 3.A.3.5.1
TC HRGMv2_1697_4 HRGMv2_1697_4_68 80134 82107 - 2.A.1.3.39
CAZyme HRGMv2_1697_4 HRGMv2_1697_4_69 82213 84057 - GH2
pfam HRGMv2_1697_4 HRGMv2_1697_4_70 84188 85450 + GHMP_kinases_N | GalKase_gal_bdg
TC HRGMv2_1697_4 HRGMv2_1697_4_71 85550 87109 + 9.B.34.1.2
Gene ID: HRGMv2_1697_4_64
Type: TC
Location: 75615 - 76310 (-)
Gene ID: HRGMv2_1697_4_65
Type: TF
Location: 76307 - 76777 (-)
Gene ID: HRGMv2_1697_4_66
Type:
Location: 76956 - 77570 (+)
Gene ID: HRGMv2_1697_4_67
Type: TC
Location: 77691 - 79979 (+)
Gene ID: HRGMv2_1697_4_68
Type: TC
Location: 80134 - 82107 (-)
Gene ID: HRGMv2_1697_4_69
Type: CAZyme
Location: 82213 - 84057 (-)
Gene ID: HRGMv2_1697_4_70
Type: pfam
Location: 84188 - 85450 (+)
Gene ID: HRGMv2_1697_4_71
Type: TC
Location: 85550 - 87109 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Actinomycetota
→
Class
Coriobacteriia
→
Order
Coriobacteriales
→
Family
QAMH01
→
Genus
QAMH01
→
Species
QAMH01 sp902493755

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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