dbCAN Logo

Cluster: HRGMv2_1692_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1692_20 HRGMv2_1692_20_1 114 1754 + 2.A.1.3.5
pfam HRGMv2_1692_20 HRGMv2_1692_20_2 1974 2954 + CorA
pfam HRGMv2_1692_20 HRGMv2_1692_20_3 2951 4672 + ABC_ATPase | ABC_N | MRB1590_C
TC HRGMv2_1692_20 HRGMv2_1692_20_4 5259 5810 + 9.B.18.1.2
CAZyme HRGMv2_1692_20 HRGMv2_1692_20_5 5813 6934 + GT4
CAZyme HRGMv2_1692_20 HRGMv2_1692_20_6 6931 8205 + GT4
pfam HRGMv2_1692_20 HRGMv2_1692_20_7 8209 9363 + Radical_SAM | SPASM
CAZyme HRGMv2_1692_20 HRGMv2_1692_20_8 9360 11714 + GT2
CAZyme HRGMv2_1692_20 HRGMv2_1692_20_9 11714 12781 + GT2
Gene ID: HRGMv2_1692_20_1
Type: TC
Location: 114 - 1754 (+)
Gene ID: HRGMv2_1692_20_2
Type: pfam
Location: 1974 - 2954 (+)
Gene ID: HRGMv2_1692_20_3
Type: pfam
Location: 2951 - 4672 (+)
Gene ID: HRGMv2_1692_20_4
Type: TC
Location: 5259 - 5810 (+)
Gene ID: HRGMv2_1692_20_5
Type: CAZyme
Location: 5813 - 6934 (+)
Gene ID: HRGMv2_1692_20_6
Type: CAZyme
Location: 6931 - 8205 (+)
Gene ID: HRGMv2_1692_20_7
Type: pfam
Location: 8209 - 9363 (+)
Gene ID: HRGMv2_1692_20_8
Type: CAZyme
Location: 9360 - 11714 (+)
Gene ID: HRGMv2_1692_20_9
Type: CAZyme
Location: 11714 - 12781 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List