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Cluster: HRGMv2_1692_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1692_4 HRGMv2_1692_4_27 24970 26082 - 4.A.2.1.9
TC HRGMv2_1692_4 HRGMv2_1692_4_28 26167 26475 - 4.A.2.1.22
TC HRGMv2_1692_4 HRGMv2_1692_4_29 26560 27015 - 4.A.2.1.9
sulfatase HRGMv2_1692_4 HRGMv2_1692_4_30 27389 28183 + S1_2
TF HRGMv2_1692_4 HRGMv2_1692_4_31 28337 29245 - HTH_DeoR
CAZyme HRGMv2_1692_4 HRGMv2_1692_4_32 29424 30521 - GH172
pfam HRGMv2_1692_4 HRGMv2_1692_4_33 30676 32256 - PRK | Hydrolase_3
peptidase HRGMv2_1692_4 HRGMv2_1692_4_34 32380 33486 - S09.UPW
TC HRGMv2_1692_4 HRGMv2_1692_4_35 33487 34428 - 8.A.5.1.4
TC HRGMv2_1692_4 HRGMv2_1692_4_36 34710 35546 - 4.A.6.1.19
TC HRGMv2_1692_4 HRGMv2_1692_4_37 35543 36349 - 4.A.6.1.19
TC HRGMv2_1692_4 HRGMv2_1692_4_38 36427 36930 - 4.A.6.1.3
pfam HRGMv2_1692_4 HRGMv2_1692_4_39 36945 37373 - EIIA-man
pfam HRGMv2_1692_4 HRGMv2_1692_4_40 37395 38252 - F_bP_aldolase
TC HRGMv2_1692_4 HRGMv2_1692_4_41 38314 39702 - 2.A.1.65.8
TF HRGMv2_1692_4 HRGMv2_1692_4_42 39938 40855 + HTH_6
TC HRGMv2_1692_4 HRGMv2_1692_4_43 40935 43157 - 9.B.97.5.1
TC HRGMv2_1692_4 HRGMv2_1692_4_44 43425 44666 - 2.A.55.3.6
TC HRGMv2_1692_4 HRGMv2_1692_4_45 44670 46517 - 1.A.26.1.2
CAZyme HRGMv2_1692_4 HRGMv2_1692_4_46 46810 47973 - CE4
CAZyme HRGMv2_1692_4 HRGMv2_1692_4_47 48695 50119 - CE4
Gene ID: HRGMv2_1692_4_27
Type: TC
Location: 24970 - 26082 (-)
Gene ID: HRGMv2_1692_4_28
Type: TC
Location: 26167 - 26475 (-)
Gene ID: HRGMv2_1692_4_29
Type: TC
Location: 26560 - 27015 (-)
Gene ID: HRGMv2_1692_4_30
Type: sulfatase
Location: 27389 - 28183 (+)
Gene ID: HRGMv2_1692_4_31
Type: TF
Location: 28337 - 29245 (-)
Gene ID: HRGMv2_1692_4_32
Type: CAZyme
Location: 29424 - 30521 (-)
Gene ID: HRGMv2_1692_4_33
Type: pfam
Location: 30676 - 32256 (-)
Gene ID: HRGMv2_1692_4_34
Type: peptidase
Location: 32380 - 33486 (-)
Gene ID: HRGMv2_1692_4_35
Type: TC
Location: 33487 - 34428 (-)
Gene ID: HRGMv2_1692_4_36
Type: TC
Location: 34710 - 35546 (-)
Gene ID: HRGMv2_1692_4_37
Type: TC
Location: 35543 - 36349 (-)
Gene ID: HRGMv2_1692_4_38
Type: TC
Location: 36427 - 36930 (-)
Gene ID: HRGMv2_1692_4_39
Type: pfam
Location: 36945 - 37373 (-)
Gene ID: HRGMv2_1692_4_40
Type: pfam
Location: 37395 - 38252 (-)
Gene ID: HRGMv2_1692_4_41
Type: TC
Location: 38314 - 39702 (-)
Gene ID: HRGMv2_1692_4_42
Type: TF
Location: 39938 - 40855 (+)
Gene ID: HRGMv2_1692_4_43
Type: TC
Location: 40935 - 43157 (-)
Gene ID: HRGMv2_1692_4_44
Type: TC
Location: 43425 - 44666 (-)
Gene ID: HRGMv2_1692_4_45
Type: TC
Location: 44670 - 46517 (-)
Gene ID: HRGMv2_1692_4_46
Type: CAZyme
Location: 46810 - 47973 (-)
Gene ID: HRGMv2_1692_4_47
Type: CAZyme
Location: 48695 - 50119 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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