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Cluster: HRGMv2_1692_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1692_38 HRGMv2_1692_38_2 432 2627 - GH36
TC HRGMv2_1692_38 HRGMv2_1692_38_3 2844 3689 - 3.A.1.1.28
TC HRGMv2_1692_38 HRGMv2_1692_38_4 3689 4561 - 3.A.1.1.28
TC HRGMv2_1692_38 HRGMv2_1692_38_5 4574 5893 - 3.A.1.1.28
TC HRGMv2_1692_38 HRGMv2_1692_38_6 5912 7021 - 3.A.1.1.26
TF HRGMv2_1692_38 HRGMv2_1692_38_7 7421 8305 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_1692_38 HRGMv2_1692_38_8 8351 10246 - GH13_4
Gene ID: HRGMv2_1692_38_2
Type: CAZyme
Location: 432 - 2627 (-)
Gene ID: HRGMv2_1692_38_3
Type: TC
Location: 2844 - 3689 (-)
Gene ID: HRGMv2_1692_38_4
Type: TC
Location: 3689 - 4561 (-)
Gene ID: HRGMv2_1692_38_5
Type: TC
Location: 4574 - 5893 (-)
Gene ID: HRGMv2_1692_38_6
Type: TC
Location: 5912 - 7021 (-)
Gene ID: HRGMv2_1692_38_7
Type: TF
Location: 7421 - 8305 (+)
Gene ID: HRGMv2_1692_38_8
Type: CAZyme
Location: 8351 - 10246 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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